Research publications acknowledging COBRE CMADP grant funding and/or Core Lab facility use

How (and when) should I credit COBRE CMADP in my publication?

Phase 3 Publications (NIH P30GM145499 and/or P20GM103638)

  1. Alhammad YM, Parthasarathy S, Ghimire R, Kerr CM, O'Connor JJ, Pfannenstiel JJ, Chanda D, Miller CA, Baumlin N, Salathe M, Unckless RL, Zuñiga S, Enjuanes L, More S, Channappanavar R, Fehr AR. SARS-CoV-2 Mac1 is required for IFN antagonism and efficient virus replication in cell culture and in mice. Proc Natl Acad Sci U S A.2023 Aug 29;120(35):e2302083120. doi: 10.1073/pnas.2302083120. Epub 2023 Aug 22. PMC10468617
  2. Apley KD, Griffith AS, Downes GM, Ross P, Farrell MP, Kendall P, Berkland CJ. CD22L Conjugation to Insulin Attenuates Insulin-Specific B Cell Activation. Bioconjug Chem.2023 Nov 15;34(11):2077-2088. Epub 2023 Oct 26. doi: 10.1021/acs.bioconjchem.3c00391. PMC11034786
  3. Burghardt E, Rakijas J, Tyagi A, Majumder P, Olson BJSC, McDonald JA. Transcriptome analysis reveals temporally regulated genetic networks during Drosophila border cell collective migration. BMC Genomics. 2023 Dec 1;24(1):728. doi: 10.1186/s12864-023-09839-8. PMC10693066
  4. DeRaad DA, McCullough JM, DeCicco LH, Hime PM, Joseph L, Andersen MJ, Moyle RG. Mitonuclear discordance results from incomplete lineage sorting, with no detectable evidence for gene flow, in a rapid radiation of Todiramphus kingfishers. Mol Ecol.2023 Sep;32(17):4844-4862. doi: 10.1111/mec.17080. Epub 2023 Jul 29. PMCID in process
  5. De Silv Mohotti N, Kobayashi H, Williams JM, Binjawadagi R, Evertsen MP, Christ EG, Hartley MD. Lipidomic analysis reveals differences in the extent of remyelination in the brain and spinal cord. bioRxiv.2023 July 26. DOI: 10.1101/2023.07.24.550351. PMC10402072
  6. De Silva Mohotti N, Kobayashi H, Williams JM, Binjawadagi R, Evertsen MP, Christ EG, Hartley MD. Lipidomic Analysis Reveals Differences in the Extent of Remyelination in the Brain and Spinal Cord. J. Proteome Res.2023 November 29. PubMed PMID: 38018851; DOI: 10.1021/acs.jproteome.3c00443. PMCID in process
  7. Drapal V, Mosier S, Norman A, Berbel G, Robinson JL, Friis EA. A preliminary In Vitro viability study of an electrically active hernia mesh on mouse fibroblasts. J. Biomater. Appl. 2023 November;38(5):662-669. PubMed PMID: 37862784; DOI: 10.1177/08853282231209312. PMCID in process
  8. Everman ER, Macdonald SJ. Gene expression variation underlying tissue-specific responses to copper stress in Drosophila melanogaster. bioRxiv.2023 Jul 18;. doi: 10.1101/2023.07.12.548746. PMC10370140
  9. Everman ER, Macdonald SJ. Gene expression variation underlying tissue-specific responses to copper stress in Drosophila melanogaster. G3 (Bethesda, Md.). 2024 March 6;14(3). PubMed PMID: 38262701; DOI: 10.1093/g3journal/jkae015. PMC11021028
  10. Herzog KS, Hackett JL, Hime PM, Klicka LB, Jensen K. First Insights into Population Structure and Genetic Diversity Versus Host Specificity in Trypanorhynch Tapeworms Using Multiplexed Shotgun Genotyping. Genome Biol Evol.2023 Oct 6;15(10):evad190. doi: 10.1093/gbe/evad190. PMC10616631
  11. Hettiarachchi P, Niyangoda S, Shigemoto A, Solowiej IJ, Burdette SC, Johnson MA. Caged Zn(2+) Photolysis in Zebrafish Whole Brains Reveals Subsecond Modulation of Dopamine Uptake. ACS Chem. Neurosci.2024 February 21;15(4):772-782. PubMed PMID: 38301116; DOI: 10.1021/acschemneuro.3c00668. PMC11036533
  12. Jin Y, Basu S, Feng M, Ning Y, Munasinghe I, Joachim AM, Li J, Madden R, Burks H, Gao P, Perera C, Werbovetz KA, Zhang K, Wang MZ. CYP5122A1 encodes an essential sterol C4-methyl oxidase in Leishmania donovani and determines the antileishmanial activity of antifungal azoles. Research square.2023 July 27. DOI: 10.21203/ PMC10402201
  13. Kim H, Kirtane AR, Kim NY, Rajesh NU, Tang C, Ishida K, Hayward AM, Langer R, Traverso G. Gastrointestinal Delivery of an mRNA Vaccine Using Immunostimulatory Polymeric Nanoparticles. AAPS J.2023 Aug 17;25(5):81. doi: 10.1208/s12248-023-00844-z. PMC10845796
  14. Kumawat S, Martinez I, Logeswaran D, Chen H, Coughlan JM, Chen JJ, Yuan Y, Sobel JM, Choi JY. Transposition, duplication, and divergence of the telomerase RNA underlies the evolution of Mimulus telomeres. bioRxiv. 2023 December 7. PubMed PMID: 38106000; DOI: 10.1101/2023.12.06.568249. PMC10723376
  15. Kywe C, Lundquist EA, Ackley BD, Lansdon P. The MAB-5/Hox family transcription factor is important for C. elegans Innate Immune Response to S. epidermidis Infection. G3 (Bethesda, Md.). 2024 March 13. PubMed PMID: 38478633; DOI: 10.1093/g3journal/jkae054. PMCID in process
  16. Mahadik SS, Burt EK, Lundquist EA. SRC-1 controls growth cone polarity and protrusion with the UNC-6/Netrin receptor UNC-5 in Caenorhabditis elegans. bioRxiv. 2023 May 20. DOI: 10.1101/2023.05.20.541322. PMC10245697
  17. Mahadik SS, Lundquist EA. A short isoform of the UNC-6/Netrin receptor UNC-5 is required for growth cone polarity and robust growth cone protrusion in Caenorhabditis elegans. Front Cell Dev Biol. 2023 Aug 15;11:1240994. doi: 10.3389/fcell.2023.1240994. eCollection 2023. PMC10464613
  18. Mandal GH, Sathyamoorthi S. Sulfamate-Tethered Aza-Wacker Strategy for a Kasugamine Synthon. J Org Chem. 2024 Jan 5;89(1):793-797. doi: 10.1021/acs.joc.3c02292. Epub 2023 Dec 8. PMC10798055
  19. Mullinax SR, Darby AM, Gupta A, Chan P, Smith BR, Unckless RL. A suite of selective pressures supports the maintenance of alleles of a Drosophila immune peptide. bioRxiv.2023 Aug 21:2023.08.18.553899. doi: 10.1101/2023.08.18.553899. Preprint. PMC10473621
  20. Nagamalla S, Thomas AA, Nirpal AK, Mague JT, Sathyamoorthi S. Ring Opening of Aziridines by Pendant Sulfamates Allows for Regioselective and Stereospecific Preparation of Vicinal Diamines. J Org Chem. 2023 Nov 17;88(22):15989-16006. doi: 10.1021/acs.joc.3c01731. Epub 2023 Oct 30. PMC10799289
  21. Nepal S, Holmstrom ED. Single-molecule-binding studies of antivirals targeting the hepatitis C virus core protein. J Virol.2023 Oct 31;97(10):e0089223. doi: 10.1128/jvi.00892-23. PMC10617558
  22. Neupane S, Talley JL, Taylor DB, Nayduch D. Bacterial communities and prevalence of antibiotic resistance genes carried within house flies (Diptera: Muscidae) associated with beef and dairy cattle farms. J Med Entomol.2023 Nov 14;60(6):1388-1397. doi: 10.1093/jme/tjad112. PMID: 37612042; PMCID in process.
  23. Paolillo VK, Ochs ME, Lundquist EA. MAB-5/Hox regulates the Q neuroblast transcriptome, including cwn-1/Wnt, to mediate posterior migration in Caenorhabditis elegans. bioRxiv. 2023 Nov 11:2023.11.09.566461. doi: 10.1101/2023.11.09.566461. Preprint. PMC10659417
  24. Shiri F, Choi J, Vietz C, Rathnayaka C, Manoharan A, Shivanka S, Li G, Yu C, Murphy MC, Soper SA, Park S. Nano-injection molding with resin mold inserts for prototyping of nanofluidic devices for single molecular detection. Lab Chip. 2023 Nov 7;23(22):4876-4887. doi: 10.1039/d3lc00543g. PMC10995647
  25. Smith BR, Patch KB, Gupta A, Knoles EM, Unckless RL. The genetic basis of variation in immune defense against Lysinibacillus fusiformis infection in Drosophila melanogaster. PLoS Pathog. 2023 Aug;19(8):e1010934. doi: 10.1371/journal.ppat.1010934. eCollection 2023 Aug. PMC10434897
  26. Tang Z, Zhao J, Li Y, Tomer S, Selvaraju M, Tien N, Sun D, Johnson DK, Zhen A, Li P, Wang J. Structural and Biological Evaluations of a Non-Nucleoside STING Agonist Specific for Human STINGA230 Variants. bioRxiv. 2023 Jul 10:2023.07.02.547363. doi: 10.1101/2023.07.02.547363. Preprint. PMC10327114
  27. Vaidyanathan S, Wijerathne H, Gamage SST, Shiri F, Zhao Z, Choi J, Park S, Witek MA, McKinney C, Verber M, Hall AR, Childers K, McNickle T, Mog S, Yeh E, Godwin AK, Soper SA. High Sensitivity Extended Nano-Coulter Counter for Detection of Viral Particles and Extracellular Vesicles. Anal. Chem. 2023 July 4;95(26):9892-9900. DOI: 10.1021/acs.analchem.3c00855. PMC11015478
  28. Veltsos P, Kelly JK. The quantitative genetics of gene expression in Mimulus guttatus. bioRxiv. 2023 Nov 21:2023.11.21.568003. doi: 10.1101/2023.11.21.568003. Preprint. PMC10690227
  29. Wessinger CA, Katzer AM, Hime PM, Rausher MD, Kelly JK, Hileman LC. A few essential genetic loci distinguish Penstemon species with flowers adapted to pollination by bees or hummingbirds. PLoS Biol. 2023 Sep;21(9):e3002294. doi: 10.1371/journal.pbio.3002294. eCollection 2023 Sep. PMC10538765
  1. Alexander A, Robbins MB, Holmes J, Moyle RG, Peterson AT. Limited movement of an avian hybrid zone in relation to regional variation in magnitude of climate change. Mol Ecol. 2022 Dec;31(24):6634-6648. doi: 10.1111/mec.16727. Epub 2022 Oct 21. PMID: 36210655; PMCID: PMC9729445.
  2. Alhammad YM, Parthasarathy S, Ghimire R, O'Connor JJ, Kerr CM, Pfannenstiel JJ, Chanda D, Miller CA, Unckless RL, Zuniga S, Enjuanes L, More S, Channappanavar R, Fehr AR. SARS-CoV-2 Mac1 is required for IFN antagonism and efficient virus replication in mice. bioRxiv. 2023 Apr 6:2023.04.06.535927. doi: 10.1101/2023.04.06.535927. Preprint. PMC10104158
  3. Hettiarachchi P, Johnson MA. Characterization of D3 Autoreceptor Function in Whole Zebrafish Brain with Fast-Scan Cyclic Voltammetry. ACS Chem Neurosci. 2022 Oct 5;13(19):2863-2873. doi: 10.1021/acschemneuro.2c00280. Epub 2022 Sep 13. PMID: 36099546; PMCID: PMC10105970.
  4. Hettiarachchi P, Niyangoda SS, Jarosova R, Johnson MA. Dopamine Release Impairments Accompany Locomotor and Cognitive Deficiencies in Rotenone-Treated Parkinson's Disease Model Zebrafish. Chem Res Toxicol. 2022 Nov 21;35(11):1974-1982. doi: 10.1021/acs.chemrestox.2c00150. Epub 2022 Sep 30. PMID: 36178476; PMCID: PMC10127151.
  5. Jarosova R, Woolfolk SK, Martinez-Rivera N, Jaeschke MW, Rosa-Molinar E, Tamerler C, Johnson MA. Spatiotemporal Imaging of Zinc Ions in Zebrafish Live Brain Tissue Enabled by Fluorescent Bionanoprobes. Molecules. 2023 Feb 28;28(5):2260. PMID: 36903504; PMCID: PMC10005619.
  6. Lou H, Hageman MJ. Development of Drug Release Model for Suspensions in ESCAR (Emulator of SubCutaneous Absorption and Release). AAPS J. 2023 Mar 22;25(3):29. doi: /10.1208/s12248-023-00799-1. PMID: 36949301; PMCID: PMC10184886.
  7. Mahadik SS, Burt EK, Lundquist EA. SRC-1 controls growth cone polarity and protrusion with the UNC-6/Netrin receptor UNC-5 in Caenorhabditis elegans. bioRxiv [Preprint]. 2023 May 20:2023.05.20.541322. doi: 10.1101/2023.05.20.541322. PMID: 37292733; PMCID: PMC10245697.
  8. Mahadik SS, Lundquist EA. A short isoform of the UNC-6/Netrin receptor UNC-5 is required for growth cone polarity and robust growth cone protrusion in Caenorhabditis elegans. bioRxiv [Preprint]. 2023 May 3:2023.05.02.539117. doi: 10.1101/2023.05.02.539117. PMID: 37205526; PMCID: PMC10187218.
  9. Privitera A, Cardaci V, Weerasekara D, Saab MW, Diolosà L, Fidilio A, Jolivet RB, Lazzarino G, Amorini AM, Camarda M, Lunte SM, Caraci F, Caruso G. Microfluidic/HPLC combination to study carnosine protective activity on challenged human microglia: Focus on oxidative stress and energy metabolism. Front Pharmacol.2023 Mar 29;14:1161794. doi: 10.3389/fphar.2023.1161794. PMID: 37063279; PMCID: PMC10095171.

Phase 2 Publications (NIH P20GM103638)

  1. Abisado-Duque RG, Townsend KA, Mckee BM, Woods K, Koirala P, Holder AJ, Craddock VD, Cabeen M, Chandler JR. An Amino Acid Substitution in Elongation Factor EF-G1A Alters the Antibiotic Susceptibility of Pseudomonas aeruginosa LasR-Null Mutants. J Bacteriol.2023 Jun 27;205(6):e0011423. doi: 10.1128/jb.00114-23. Epub 2023 May 16. PMID: 37191503; PMCID: PMC10294626.
  2. Abisado-Duque RG, McKee BM, Townsend KA, Woods K, Koirala P, Holder AJ, Craddock VD, Cabeen MT, Chandler JR. Tobramycin adaptation alters the antibiotic susceptibility of Pseudomonas aeruginosa quorum sensing-null mutants. bioRxiv [Preprint]. 2023 Mar 19:2023.01.13.523864. doi: 10.1101/2023.01.13.523864. Update in: J Bacteriol. 2023 May 16;:e0011423. PMID: 36711731; PMCID: PMC9882136.
  3. Alexander A, Robbins MB, Holmes J, Moyle RG, Peterson AT. Limited movement of an avian hybrid zone in relation to regional variation in magnitude of climate change. Mol Ecol. 2022 Dec;31(24):6634-6648. doi: 10.1111/mec.16727. Epub 2022 Oct 21. PMID: 36210655; PMCID: PMC9729445.
  4. Athapattu US, Rathnayaka C, Vaidyanathan S, Gamage SST, Choi J, Riahipour R, Manoharan A, Hall AR, Park S, Soper SA. Tailoring Thermoplastic In-Plane Nanopore Size by Thermal Fusion Bonding for the Analysis of Single Molecules. ACS Sens.2021 Aug 27;6(8):3133-3143. PMID: 34406743; PMCID: PMC8482307.
  5. Bansal S, Floyd ER, Kowalski M, Aikman E, Elrod P, Burkey K, Chahla J, LaPrade RF, Maher SA, Robinson JL, Patel JM. Meniscal Repair: The Current State and Recent Advances in Augmentation. J Orthop Res.2021 Jul;39(7):1368-1382. Review. PMID: 33751642; PMCID: PMC8249336.
  6. Budiardjo SJ, Stevens JJ, Calkins AL, Ikujuni AP, Wimalasena VK, Firlar E, Case DA, Biteen JS, Kaelber JT, Slusky JSG. Colicin E1 opens its hinge to plug TolC. Elife. 2022 Feb 24;11:e73297. doi: 10.7554/eLife.73297. PMID: 35199644; PMCID: PMC9020818.
  7. Calle-Tobón A, Holguin-Rocha AF, Moore C, Rippee-Brooks M, Rozo-Lopez P, Harrod J, Fatehi S, Rua-Uribe GL, Park Y, Londoño-Rentería B. Blood Meals With Active and Heat-Inactivated Serum Modifies the Gene Expression and Microbiome of Aedes albopictus. Front Microbiol. 2021 Sep 9:12:724345. doi: 10.3389/fmicb.2021.724345. eCollection 2021. PMID: 34566927; PMCID: PMC8458951.
  8. Chan KO, Hutter CR, Wood PL Jr., Su Y-C, Brown RM. Gene flow increases phylogenetic structure and inflates cryptic species estimations: a case study on widespread Philippine puddle frogs (Occidozyga laevis). Systematic Biology2022; 71:40–57.
  9. de Mello PLH, Hime PM, Glor RE. Transcriptomic Analysis of Skin Color in Anole Lizards. Genome Biol Evol.2021 Jul 6;13(7):evab110. PMID: 33988681; PMCID: PMC8290120.
  10. Dimond ZE, Suchland RJ, Baid S, LaBrie SD, Soules KR, Stanley J, Carrell S, Kwong F, Wang Y, Rockey DD, Hybiske K, Hefty PS. Inter-species lateral gene transfer focused on the Chlamydia plasticity zone identifies loci associated with immediate cytotoxicity and inclusion stability. Mol Microbiol. 2021 Dec;116(6):1433-1448. PMID: 34738268; PMCID: PMC9119408.
  11. Do N, Ackley BD, Landson P. Draft Genome Sequence of Novel Staphylococcus epidermidis Strain EVL2000, Exhibiting Pathogenicity against Caenorhabditis elegans. Microbiol Resour Announc.2022 Apr 21;11(4):e0123921. Epub 2022 Mar 14. PMID: 35286161; PMCID: PMC9022524.
  12. Dorador AP, Dalikova M, Cerbin S, Stillman CM, Zych MG, Hawley RS, Miller DE, Ray DA, Funikov SY, Evgen'ev MB, Blumenstiel JP. Paramutation-like Epigenetic Conversion by piRNA at the Telomere of Drosophila virilis. Biology (Basel). 2022 Oct 9;11(10):1480. doi: 10.3390/biology11101480. PMID: 36290385; PMCID: PMC9598792.
  13. Everman ER, Macdonald SJ, Kelly JK. 2023. The genetic basis of adaptation to copper pollution in Drosophila melanogaster.Front. Genet., 04 April 2023; 14:1144221. doi: 10.3389/fgene.2023.1144221. eCollection 2023. PMID: 37082199; PMCID: PMC10110907.
  14. Fahad AS, Chung CY, López Acevedo SN, Boyle N, Madan B, Gutiérrez-González MF, Matus-Nicodemos R, Laflin AD, Ladi RR, Zhou J, Wolfe J, Llewellyn-Lacey S, Koup RA, Douek DC, Balfour HH Jr, Price DA, DeKosky BJ. Cell activation-based screening of natively paired human T cell receptor repertoires. Sci Rep.2023 May 17;13(1):8011. doi: 10.1038/s41598-023-31858-4. PMID: 37198258; PMCID: PMC10192375.
  15. Fahad AS, Chung CY, Lopez Acevedo SN, Boyle N, Madan B, Gutiérrez-González MF, Matus-Nicodemos R, Laflin AD, Ladi RR, Zhou J, Wolfe J, Llewellyn-Lacey S, Koup RA, Douek DC, Balfour HH Jr, Price DA, DeKosky BJ. Immortalization and functional screening of natively paired human T cell receptor repertoires. Protein Eng Des Sel. 2022 Feb 17;35:gzab034. PMID: 35174859; PMCID: PMC9005053.
  16. Felmlee KR, Macdonald SJ, Everman ER. Pre-adult exposure to three heavy metals leads to changes in the head transcriptome of adult flies. MicroPubl Biol. 2022 Jul 2;2022:10.17912/micropub.biology.000591. doi: 10.17912/micropub.biology.000591. PMID: 35856016; PMCID: PMC9287740.
  17. Gamage SST, Pahattuge TN, Wijerathne H, Childers K, Vaidyanathan S, Athapattu US, Zhang L, Zhao Z, Hupert ML, Muller RM, Muller-Cohn J, Dickerson J, Dufek D, Geisbrecht BV, Pathak H, Pessetto Z, Gan GN, Choi J, Park S, Godwin AK, Witek MA, Soper SA. Microfluidic affinity selection of active SARS-CoV-2 virus particles. Sci Adv. 2022 Sep 30;8(39):eabn9665. PMID: 36170362; PMCID: PMC9519043.
  18. Gunawardhana SM, Holmstrom ED. Apolar chemical environments compact unfolded RNAs and can promote folding. Biophys Rep (N Y). 2021 Sep 8;1(1):100004. doi: 10.1016/j.bpr.2021.100004. Epub 2021 Jul 21. PMID: 35382036; PMCID: PMC8978554.
  19. Hasan MK, El Qaidi S, McDonald P, Roy A, Hardwidge PR. Repurposing Avasimibe to Inhibit Bacterial Glycosyltransferases. Pathogens. 2022 Mar 17;11(3):370. doi: 10.3390/pathogens11030370. PMID: 35335693; PMCID: PMC8953086.
  20. Hill T, Unckless RL, Perlmutter JI. Positive Selection and Horizontal Gene Transfer in the Genome of a Male-Killing Wolbachia. Mol Biol Evol.2022 Jan 7;39(1):msab303. doi: 10.1093/molbev/msab303. PMID: 34662426; PMCID: PMC8763111.
  21. Hu M, Brown V, Jackson JM, Wijerathne H, Pathak H, Koestler DC, Nissen E, Hupert ML, Muller R, Godwin AK, Witek MA, Soper SA. Assessing Breast Cancer Molecular Subtypes Using Extracellular Vesicles' mRNA. Anal Chem.2023 May 16;95(19):7665-7675. doi: 10.1021/acs.analchem.3c00624. Epub 2023 Apr 18. PMID: 37071799; PMCID: PMC10243595.
  22. Huang A, Groer C, Lu R, Forrest ML, Griffin JD, Berkland CJ. Glatiramer Acetate Complexed with CpG as Intratumoral Immunotherapy in Combination with Anti-PD-1. Mol Pharm. 2022 Nov 7;19(11):4357-4369. doi: 10.1021/acs.molpharmaceut.2c00730. Epub 2022 Oct 25. PMID: 36282296; PMCID in progress.
  23. Huang A, Jin W, Fahad AS, Mussman BK, Nicchia GP, Madan B, de Souza MO, Griffin JD, Bennett JL, Frigeri A, Berkland CJ, DeKosky BJ. Strategies to Screen Anti-AQP4 Antibodies from Yeast Surface Display Libraries. Antibodies (Basel).2022 Jun 5;11(2):39. doi: 10.3390/antib11020039. PMID: 35735358; PMCID: PMC9220140.
  24. Huynh K, Smith BR, Macdonald SJ, Long AD. Genetic variation in chromatin state across multiple tissues in Drosophila melanogaster. PLoS Genet.2023 May 5;19(5):e1010439. doi: 10.1371/journal.pgen.1010439. PMID: 37146087; PMCID: PMC10191298.
  25. Jarosova R, Douglass AD, Johnson MA. Optimized Sawhorse Waveform for the Measurement of Oxytocin Release in Zebrafish. Anal Chem. 2022 Feb 15;94(6):2942-2949. doi: 10.1021/acs.analchem.1c04879. Epub 2022 Feb 2. PMID: 35107979; PMCID: PMC9087480.
  26. Jarosova R, Niyangoda SS, Hettiarachchi P, Johnson MA. Impaired Dopamine Release and Latent Learning in Alzheimer's Disease Model Zebrafish. ACS Chem Neurosci.2022 Oct 5;13(19):2924-2931. doi: 10.1021/acschemneuro.2c00484. Epub 2022 Sep 16. PMID: 36113115; PMCID: PMC10127145.
  27. Johnson PM, Lehtinen JM, Robinson JL. Surfactant Interactions and Solvent Phase Solubility Modulate Small Molecule Release from Emulsion Electrospun Fibers. AIChE J.2021 Dec;67(12):e17470. doi: 10.1002/aic.17470. Epub 2021 Sep 26. PMID: 36582410; PMCID: PMC9797104.
  28. Kelly JK. The genomic scale of fluctuating selection in a natural plant population. Evol Lett.2022 Dec;6(6):506-521. doi: 10.1002/evl3.308. eCollection 2022 Dec. PubMed PMID: 36579169; PMCID: PMC9783439.
  29. Knewtson KE, Ohl NR, Robinson JL. Estrogen Signaling Dictates Musculoskeletal Stem Cell Behavior: Sex Differences in Tissue Repair. Tissue Eng Part B Rev. 2022  Aug;28(4):789-812. PMID: 34409868; PMCID: PMC9419932.
  30. Kurhade SE, Ross P, Gao FP, Farrell MP. Lectin Drug Conjugates Targeting High Mannose N-Glycans. Chembiochem. 2022 Oct 6;23(19):e202200266. Epub 2022 Jul 27. PMID: 35816406; PMCID: PMC9738879.
  31. Lama J, Srivastav S, Tasnim S, Hubbard D, Hadjipanteli S, Smith BR, Macdonald SJ, Green L, Kelleher ES. Genetic variation in P-element dysgenic sterility is associated with double-strand break repair and alternative splicing of TE transcripts. PLoS Genet.2022 Dec 7;18(12):e1010080. doi: 10.1371/journal.pgen.1010080. eCollection 2022 Dec. PMID: 36477699; PMCID: PMC9762592.
  32. Lansdon P, Carlson M, Ackley BD. Wild-type Caenorhabditis elegans isolates exhibit distinct gene expression profiles in response to microbial infection. BMC Genomics.2022 Mar 23;23(1):229. doi: 10.1186/s12864-022-08455-2.  PMID: 35321659; PMCID: PMC8943956.
  33. Loo C, Koirala P, Smith NC, Evans KC, Benomar S, Parisi IR, Oller A, Chandler JR. Cross-species activation of hydrogen cyanide production by a promiscuous quorum-sensing receptor promotes Chromobacterium subtsugae competition in a dual-species model. Microbiology (Reading). 2023 Feb;169(2):001294. doi: 10.1099/mic.0.001294. PMID: 36790401; PMCID: PMC10197875.
  34. Lou H, Hageman MJ. Development of an In Vitro System To Emulate an In Vivo Subcutaneous Environment: Small Molecule Drug Assessment. Mol Pharm.2022 Nov 7;19(11):4017-4025. doi: 10.1021/acs.molpharmaceut.2c00490. Epub 2022 Oct 24. PMID: 36279508; PMCID: PMC10228092.
  35. Macdonald SJ, Cloud-Richardson KM, Sims-West DJ, Long AD. Powerful, efficient QTL mapping in Drosophila melanogaster using bulked phenotyping and pooled sequencing. Genetics. 2022 Mar 3;220(3):iyab238. PMID: 35100395; PMCID: PMC8893256.
  36. Macdonald SJ, Long AD. Discovery of malathion resistance QTL in Drosophila melanogaster using a bulked phenotyping approach. G3 (Bethesda).2022 Dec 1;12(12):jkac279. doi: 10.1093/g3journal/jkac279. PMID: 36250804; PMCID: PMC9713458.
  37. Mahadik SS, Lundquist EA. The PH/MyTH4/FERM molecule MAX-1 inhibits UNC-5 activity in the regulation of VD growth cone protrusion in Caenorhabditis elegans. Genetics. 2022 May 5;221(1):iyac047. doi: 10.1093/genetics/iyac047. PMID: 35348689; PMCID: PMC9071540.
  38. Mahadik SS, Lundquist EA. TOM-1/tomosyn acts with the UNC-6/netrin receptor UNC-5 to inhibit growth cone protrusion in Caenorhabditis elegans. Development.2023 Apr 1;150(7). doi: 10.1242/dev.201031. Epub 2023 Apr 4. PMID: 37014062; PMCID: PMC10112904.
  39. Maza N, Wang D, Kowalski C, Stoveken HM, Dao M, Sial OK, Giles AC, Grill B, Martemyanov KA. Ptchd1 mediates opioid tolerance via cholesterol-dependent effects on μ-opioid receptor trafficking. Nat Neurosci.2022 Sep;25(9):1179-1190. doi: 10.1038/s41593-022-01135-0. Epub 2022 Aug 18. PMID: 35982154; PMCID: PMC10294603.
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16.  Knewtson KE, Perera C, Hymel D, Gao Z, Lee MM, Peterson BR. Antibody-Drug Conjugate that Exhibits Synergistic Cytotoxicity with an Endosome-Disruptive Peptide. ACS Omega.2019 Jul 31;4(7):12955-12968. eCollection 2019 Jul 31. PubMed PMID: 31460422; PubMed Central PMCID: PMC6690568.

17.  Koseva BS, Hackett JL, Zhou Y, Harris BR, Kelly JK, Greenfield MD, Gleason JM, Macdonald SJ. Quantitative Genetic Mapping and Genome Assembly in the Lesser Wax Moth Achroia grisella. G3(Bethesda).2019 Jul 9;9(7):2349-2361. PubMed PMID: 31101652; PubMed Central PMCID: PMC6643890.

18.  LaBrie SD, Dimond ZE, Harrison KS, Baid S, Wickstrum J, Suchland RJ, Hefty PS. Transposon Mutagenesis in Chlamydia trachomatis Identifies CT339 as a ComEC Homolog Important for DNA Uptake and Lateral Gene Transfer. MBio. 2019 Aug 6;10(4). PubMed PMID: 31387908; PubMed Central PMCID: PMC6686042.

19.  Lagerman CE, López Acevedo SN, Fahad AS, Hailemariam AT, Madan B, DeKosky BJ. Ultrasonically-guided flow focusing generates precise emulsion droplets for high-throughput single cell analyses. J Biosci Bioeng.2019 Aug;128(2):226-233. PubMed PMID: 30904454; PubMed Central PMCID: PMC6688500.

20.  McGill JL, Kelly SM, Guerra-Maupome M, Winkley E, Henningson J, Narasimhan B, Sacco RE. Vitamin A deficiency impairs the immune response to intranasal vaccination and RSV infection in neonatal calves. Sci Rep.2019 Oct 22;9(1):15157. PubMed PMID: 31641172; PubMed Central PMCID: PMC6805856.

21.  Pahattuge TN, Jackson JM, Rane D, Wijerathne H, Brown V, Witek MA,Perera C, Givens RS, Peterson BR, Soper SA. Visible photorelease of liquid biopsy markers following microfluidic affinity-enrichment. Chemical Communications (Cambridge, England). 2020 April 14;56(29):4098-4101. PubMed PMID: 32163053; PubMed Central PMCID: PMC7469076.

22.  Radeke, LJ and Herman, MA. Identification and characterization of differentially expressed genes in Caenorhabditis elegans in response to pathogenic and nonpathogenic Stenotrophomonas maltophilia. BMC Microbiol. 2020 Jun 19;20(1):170. PubMed PMID: 32560629; PubMed Central PMCID: PMC7304212.

23.  Robinson JL, Johnson PM, Kister K, Yin MT, Chen J, Wadhwa S. Estrogen signaling impacts temporomandibular joint and periodontal disease pathology. Odontology. 2020 Apr;108(2):153-165. Review. PubMed PMID: 31270648; PubMed Central PMCID: PMC7192637.

24.  Slinger BL, Deay JJ, Chandler JR, Blackwell HE. Potent modulation of the CepR quorum sensing receptor and virulence in a Burkholderia cepacia complex member using non-native lactone ligands. Sci Rep.2019 Sep 17;9(1):13449. PubMed PMID: 31530834; PubMed Central PMCID: PMC6748986.

25.  Thippabhotla S, Zhong C, He M. 3D cell culture stimulates the secretion of in vivo like extracellular vesicles. Sci Rep.2019 Sep 10;9(1):13012. PubMed PMID: 31506601; PubMed Central PMCID: PMC6736862.

26.  Wang D, Stoveken HM, Zucca S, Dao M, Orlandi C, Song C, Masuho I, Johnston C, Opperman KJ, Giles AC, Gill MS, Lundquist EA, Grill B, Martemyanov KA. Genetic behavioral screen identifies an orphan anti-opioid system. Science. 2019 Sep 20;365(6459):1267-1273. PubMed PMID: 31416932; PubMed Central PMCID: PMC7074901.

27.  Waters R, Subham S, Pacelli S, Modaresi S, Chakravarti AR, Paul A. Development of MicroRNA-146a-Enriched Stem Cell Secretome for Wound-Healing Applications. Molecular Pharmaceutics. 2019 October 7;16(10):4302-4312. PubMed PMID: 31398053; PubMed Central PMCID: PMC7260687.

28.  Wessinger CA, Rausher MD, Hileman LC. Adaptation to hummingbird pollination is associated with reduced diversification in Penstemon. Evolution letters. 2019 October;3(5):521-533. PubMed PMID: 31636944; PubMed Central PMCID: PMC6791294.

29.  Wu X, Gardashova G, Lan L, Han S, Zhong C, Marquez RT, Wei L, Wood S, Roy S, Gowthaman R, Karanicolas J, Gao FP, Dixon DA, Welch DR, Li L, Ji M, Aubé J, Xu L. Targeting the interaction between RNA-binding protein HuR and FOXQ1 suppresses breast cancer invasion and metastasis. Commun Biol. 2020 April 24;3(1):193. PubMed PMID: 32332873; PubMed Central PMCID: PMC7181695.

30.  Zhang P, Wu X, Gardashova G, Yang Y, Zhang Y, Xu L, Zeng Y. Molecular and functional extracellular vesicle analysis using nanopatterned microchips monitors tumor progression and metastasis. Sci Transl Med. 2020 June 10;12(547). PubMed PMID: 32522804; PubMed Central PMCID: PMC8024111.

31.  Zhou X, Ravichandran GC, Zhang P, Yang Y, Zeng Y. A microfluidic alternating-pull-push active digitization method for sample-loss-free digital PCR. Lab Chip.2019 Dec 21;19(24):4104-4116. PubMed PMID: 31720646; PubMed Central PMCID: PMC6894176.

32.  Zhu Q, Hamilton M, Vasquez B, He M. 3D-printing enabled micro-assembly of a microfluidic electroporation system for 3D tissue engineering. Lab Chip.2019 Jul 9;19(14):2362-2372. PubMed PMID: 31214669; PubMed Central PMCID: PMC6636854.

1.  Ahmed I, Roy BC, Raach RT, Owens SM, Xia L, Anant S, Sampath V, Umar S. Enteric infection coupled with chronic Notch pathway inhibition alters colonic mucus composition leading to dysbiosis, barrier disruption and colitis.PLoS One. 2018 ;13(11):e0206701. eCollection 2018. PubMed PMID: 30383855; PubMed Central PMCID: PMC6211731. 

2.  Al-Hashimi H, Chiarelli T, Lundquist EA, Buechner M. Novel exc Genes Involved in Formation of the Tubular Excretory Canals of Caenorhabditis elegans. G3 (Bethesda).2019 May 7;9(5):1339-1353. PubMed PMID: 30885922; PubMed Central PMCID: PMC6505153.

3.  Al-Hashimi H, Hall DH, Ackley BD, Lundquist EA, Buechner M. Tubular Excretory Canal Structure Depends on Intermediate Filaments EXC-2 and IFA-4 in Caenorhabditis elegans. Genetics.2018 Oct;210(2):637-652. PubMed PMID: 29945901; PubMed Central PMCID: PMC6216577.

4.  Alrefai MT, Tarola CL, Raagas R, Ridwan K, Shalal M, Lomis N, Paul A, Alrefai MD, Prakash S, Schwertani A, Shum-Tim D. Functional Assessment of Pluripotent and Mesenchymal Stem Cell Derived Secretome in Heart Disease. Ann Stem Cell Res. 2019;2(1):29-36. PubMed PMID: 32064466; PubMed Central PMCID: PMC7020557.

5.  Bandyopadhyay A, Wang H, Ray JCJ. Lineage space and the propensity of bacterial cells to undergo growth transitions. PLoS Comput Biol. 2018 Aug;14(8):e1006380. PubMed PMID: 30133447; PubMed Central PMCID: PMC6122811.

6.  Basu S, Pacelli S, Feng Y, Lu Q, Wang J, Paul A. Harnessing the Noncovalent Interactions of DNA Backbone with 2D Silicate Nanodisks To Fabricate Injectable Therapeutic Hydrogels. ACS Nano.2018 Oct 23;12(10):9866-9880. PubMed PMID: 30189128; PubMed Central PMCID: PMC6563937.

7.  Campos CDM, Gamage SST, Jackson JM, Witek MA, Park DS, Murphy MC, Godwin AK, Soper SA. Microfluidic-based solid phase extraction of cell free DNA. Lab Chip.2018 Nov 6;18(22):3459-3470. PubMed PMID: 30339164; PubMed Central PMCID: PMC6391159.

8.  Cao H, Zhou X, Zeng Y. Microfluidic Exponential Rolling Circle Amplification for Sensitive microRNA Detection Directly from Biological Samples. Sens Actuators B Chem. 2019 Jan 15;279:447-457. PubMed PMID: 30533973; PubMed Central PMCID: PMC6284813.

9.  Caruso G, Fresta CG, Lazzarino G, Distefano DA, Parlascino P, Lunte SM, Lazzarino G, Caraci F. Sub-Toxic Human Amylin Fragment Concentrations Promote the Survival and Proliferation of SH-SY5Y Cells via the Release of VEGF and HspB5 from Endothelial RBE4 Cells. Int J Mol Sci.2018 Nov 20;19(11). PubMed PMID: 30463298; PubMed Central PMCID: PMC6274958.

10.  Caruso G, Fresta CG, Musso N, Giambirtone M, Grasso M, Spampinato SF, Merlo S, Drago F, Lazzarino G, Sortino MA, Lunte SM, Caraci F. Carnosine Prevents Aβ-Induced Oxidative Stress and Inflammation in Microglial Cells: A Key Role of TGF-β1. Cells. 2019 Jan 17;8(1). PubMed PMID: 30658430; PubMed Central PMCID: PMC6356400.

11.  Chakravarti AR, Pacelli S, Alam P, Bagchi S, Modaresi S, Czirok A, Ahmed RP,Paul A. Pre-Conditioning Stem Cells in a Biomimetic Environment for Enhanced Cardiac Tissue Repair: In Vitro and In Vivo Analysis. Cel. Mol. Bioeng.2018 October; 11(5):321-336. PubMed PMID: 31579283; PubMed Central PMCID: PMC6774647.

12.  Colicchio JM, Kelly JK, Hileman LC. Parental experience modifies the Mimulus methylome. BMC Genomics. 2018 Oct 12;19(1):746. PubMed PMID: 30314445; PubMed Central PMCID: PMC6186029.

13.  Cooley SM, Hamilton T, Deeds EJ, Ray JCJ. A novel metric reveals previously unrecognized distortion in dimensionality reduction of scRNA-Seq data. bioRxiv 689851; doi:

14.  Erwin AA, Blumenstiel JP. Aging in the Drosophila ovary: contrasting changes in the expression of the piRNA machinery and mitochondria but no global release of transposable elements. BMC Genomics.2019 Apr 23;20(1):305. PubMed PMID: 31014230; PubMed Central PMCID: PMC6480902.

15.  Griffin JD, Christopher MA, Thati S, Salash JR, Pressnall MM, Weerasekara DB, Lunte SM, Berkland CJ. Tocopherol Emulsions as Functional Autoantigen Delivery Vehicles Evoke Therapeutic Efficacy in Experimental Autoimmune Encephalomyelitis. Mol Pharm.2019 Feb 4;16(2):607-617. PubMed PMID: 30615457; PubMed Central PMCID: PMC6557722.

16.  Guerra-Maupome M, Palmer MV, Waters WR, McGill JL. Characterization of γδ T Cell Effector/Memory Subsets Based on CD27 and CD45R Expression in Response to Mycobacterium bovis Infection. Immunohorizons. 2019 Jun 12;3(6):208-218. PubMed PMID: 31356167; PubMed Central PMCID: PMC6875775.

17.  Guerra-Maupome M, Vang DX, McGill JL. Aerosol vaccination with Bacille Calmette-Guerin induces a trained innate immune phenotype in calves. PLoS One.2019;14(2):e0212751. eCollection 2019. PubMed PMID: 30794653; PubMed Central PMCID: PMC6386280.

18.  Gujar MR, Stricker AM, Lundquist EA. RHO-1 and the Rho GEF RHGF-1 interact with UNC-6/Netrin signaling to regulate growth cone protrusion and microtubule organization in Caenorhabditis elegans. PLoS Genet. 2019 Jun;15(6):e1007960. eCollection 2019 Jun. PubMed PMID: 31233487; PubMed Central PMCID: PMC6611649.

19.  Gujar MR, Sundararajan L, Stricker A, Lundquist EA. Control of Growth Cone Polarity, Microtubule Accumulation, and Protrusion by UNC-6/Netrin and Its Receptors in Caenorhabditis elegans. Genetics.2018 Sep;210(1):235-255. PubMed PMID: 30045855; PubMed Central PMCID: PMC6116952.

20.  Gunawardhana SM, Lunte SM. Continuous Monitoring of Adenosine and its Metabolites using Microdialysis Coupled to Microchip Electrophoresis with Amperometric Detection. Anal. Methods. 2018 July; 10(30):3737. PubMed PMID: 31579297; PubMed Central PMCID: PMC6774626.

21.  Hu W, Soper SA, Jackson JM. Time-Delayed Integration-Spectral Flow Cytometer (TDI-SFC) for Low-Abundance-Cell Immunophenotyping. Anal Chem.2019 Apr 2;91(7):4656-4664. PubMed PMID: 30817129; PubMed Central PMCID: PMC6554645.

22.  Klaus JR, Deay J, Neuenswander B, Hursh W, Gao Z, Bouddhara T, Williams TD, Douglas J, Monize K, Martins P, Majerczyk C, Seyedsayamdost MR, Peterson BR, Rivera M, Chandler JR. Malleilactone Is a Burkholderia pseudomallei Virulence Factor Regulated by Antibiotics and Quorum Sensing. J Bacteriol.2018 Jul 15;200(14). PubMed PMID: 29735757; PubMed Central PMCID: PMC6018353.

23.  Knewtson KE, Rane D, Peterson BR. Targeting Fluorescent Sensors to Endoplasmic Reticulum Membranes Enables Detection of Peroxynitrite During Cellular Phagocytosis. ACS Chem Biol.2018 Sep 21;13(9):2595-2602. PubMed PMID: 30141903; PubMed Central PMCID: PMC6204062.

24.  McGill JL, Guerra-Maupome M, Schneider S. Prophylactic digoxin treatment reduces IL-17 production in vivo in the neonatal calf and moderates RSV-associated disease. PLoS One.2019;14(3):e0214407. eCollection 2019. PubMed PMID: 30908540; PubMed Central PMCID: PMC6433258.

25.  Mongue AJ, Hansen ME, Gu L, Sorenson CE, Walters JR. Nonfertilizing sperm in Lepidoptera show little evidence for recurrent positive selection. Mol Ecol.2019 May;28(10):2517-2530. PubMed PMID: 30972892; PubMed Central PMCID: PMC6584056.

26.  Pacelli S, Rampetsreiter K, Modaresi S, Subham S, Chakravarti AR, Lohfeld S, Detamore MS, Paul A. Fabrication of a Double-Cross-Linked Interpenetrating Polymeric Network (IPN) Hydrogel Surface Modified with Polydopamine to Modulate the Osteogenic Differentiation of Adipose-Derived Stem Cells. ACS Appl Mater Interfaces.2018 Aug 1;10(30):24955-24962. PubMed PMID: 29969894; PubMed Central PMCID: PMC6535093.

27.  Reiner DJ, Lundquist EA. Small GTPases. WormBook.2018 Aug 16;2018:1-65. Review. PubMed PMID: 27218782; PubMed Central PMCID: PMC6369420.

28.  Siegel JM, Schilly KM, Wijesinghe MB, Caruso G, Fresta CG, Lunte SM. Optimization of a microchip electrophoresis method with electrochemical detection for the determination of nitrite in macrophage cells as an indicator of nitric oxide production. Anal. Methods. 2019 Jan 14;11(2):148-156. PubMed PMID: 31579404; PubMed Central PMCID: PMC6774641.

29.  Wessinger CA, Kelly JK, Jiang P, Rausher MD, Hileman LC. SNP-skimming: A fast approach to map loci generating quantitative variation in natural populations. Mol Ecol Resour.2018 Nov;18(6):1402-1414. PubMed PMID: 30033616; PubMed Central PMCID: PMC6207453.

30.  Yang Y, Zeng Y. Microfluidic communicating vessel chip for expedited and automated immunomagnetic assays. Lab Chip.2018 Dec 4;18(24):3830-3839. PubMed PMID: 30394473; PubMed Central PMCID: PMC6279511.

31.  Zhang P, Crow J, Lella D, Zhou X, Samuel G, Godwin AK, Zeng Y. Ultrasensitive quantification of tumor mRNAs in extracellular vesicles with an integrated microfluidic digital analysis chip. Lab Chip.2018 Dec 4;18(24):3790-3801. PubMed PMID: 30474100; PubMed Central PMCID: PMC6310142.

32.  Zhang P, Zhou X, He M, Shang Y, Tetlow AL, Godwin AK, Zeng Y. Ultrasensitive detection of circulating exosomes with a 3D-nanopatterned microfluidic chip. Nat Biomed Eng.2019 Jun;3(6):438-451. PubMed PMID: 31123323; PubMed Central PMCID: PMC6556143.

33.  Zhang P, Zhou X, Zeng Y. Multiplexed immunophenotyping of circulating exosomes on nano-engineered ExoProfile chip towards early diagnosis of cancer. Chemical science2019 June 7;10(21):5495-5504. PubMed PMID: 31293733; PubMed Central PMCID: PMC6544119.

34.  Zhao Z, McGill J, Gamero-Kubota P, He M. Microfluidic on-demand engineering of exosomes towards cancer immunotherapy. Lab Chip.2019 May 14;19(10):1877-1886. PubMed PMID: 31044204; PubMed Central PMCID: PMC6520140.

1.  Abisado RG, Benomar S, Klaus JR, Dandekar AA, Chandler JR. Bacterial Quorum Sensing and Microbial Community Interactions. MBio.2018 May 22;9(3). pii: e02331-17. PubMed PMID: 29789364; PubMed Central PMCID: PMC5964356.

2.  Arif M, Pandey R, Alam P, Jiang S, Sadayappan S, Paul A, Ahmed RPH. MicroRNA-210-mediated proliferation, survival, and angiogenesis promote cardiac repair post myocardial infarction in rodents. J Mol Med (Berl).2017 Dec;95(12):1369-1385. PubMed PMID: 28948298; PubMed Central PMCID: PMC5941944.

3.  Brawley SH, Blouin NA, Ficko-Blean E, Wheeler GL, Lohr M, Goodson HV, Jenkins JW, Blaby-Haas CE, Helliwell KE, Chan CX, Marriage TN, Bhattacharya D, Klein AS, Badis Y, Brodie J, Cao Y, Collén J, Dittami SM, Gachon CMM, Green BR, Karpowicz SJ, Kim JW, Kudahl UJ, Lin S, Michel G, Mittag M, Olson BJSC, Pangilinan JL, Peng Y, Qiu H, Shu S, Singer JT, Smith AG, Sprecher BN, Wagner V, Wang W, Wang ZY, Yan J, Yarish C, Zäuner-Riek S, Zhuang Y, Zou Y, Lindquist EA, Grimwood J, Barry KW, Rokhsar DS, Schmutz J, Stiller JW, Grossman AR, Prochnik SE. Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta). Proc Natl Acad Sci U S A.2017 Aug 1;114(31):E6361-E6370. PubMed PMID: 28716924; PubMed Central PMCID: PMC5547612.

4.  Caruso G, Fresta CG, Martinez-Becerra F, Antonio L, Johnson RT, de Campos RPS, Siegel JM, Wijesinghe MB, Lazzarino G, Lunte SM. Carnosine modulates nitric oxide in stimulated murine RAW 264.7 macrophages. Mol Cell Biochem.2017 Jul;431(1-2):197-210. PubMed PMID: 28290048; PubMed Central PMCID: PMC5697141.

5.  Caruso G, Fresta CG, Siegel JM, Wijesinghe MB, Lunte SM. Microchip electrophoresis with laser-induced fluorescence detection for the determination of the ratio of nitric oxide to superoxide production in macrophages during inflammation. Anal Bioanal Chem. 2017 Jul;409(19):4529-4538. PubMed PMID: 28555342; PubMed Central PMCID: PMC5525329.

6.  El Qaidi S, Zhu C, McDonald P, Roy A, Maity PK, Rane D, Perera C, Hardwidge PR. High-Throughput Screening for Bacterial Glycosyltransferase Inhibitors. Front Cell Infect Microbiol.2018;8:435. doi: 10.3389/fcimb.2018.00435. eCollection 2018. PubMed PMID: 30619781; PubMed Central PMCID: PMC6305410.

7.  Evans KC, Benomar S, Camuy-Vélez LA, Nasseri EB, Wang X, Neuenswander B, Chandler JR. Quorum-sensing control of antibiotic resistance stabilizes cooperation in Chromobacterium violaceum. ISME J.2018 Jan 26. PubMed PMID: 29374267; PubMed Central PMCID: PMC5932061.

8.  Field TM, Shin M, Stucky CS, Loomis J, Johnson MA. Electrochemical Measurement of Dopamine Release and Uptake in Zebrafish Following Treatment with Carboplatin. Chemphyschem.2018 May 22;19(10):1192-1196. PubMed PMID: 29573086; PubMed Central PMCID: PMC6013284.

9.  Fowler SC, Mosher LJ, Godar SC, Bortolato M. Assessment of gait and sensorimotor deficits in the D1CT-7 mouse model of Tourette syndrome. J Neurosci Methods2017 Dec 1;292:37-44. PubMed PMID: 28099872; PubMed Central PMCID: PMC5511586.

10.  Fresta CG, Chakraborty A, Wijesinghe MB, Amorini AM, Lazzarino G, Lazzarino G, Tavazzi B, Lunte SM, Caraci F, Dhar P, Caruso G. Non-toxic engineered carbon nanodiamond concentrations induce oxidative/nitrosative stress, imbalance of energy metabolism, and mitochondrial dysfunction in microglial and alveolar basal epithelial cells. Cell Death Dis. 2018 Feb 14;9(2):245. PubMed PMID: 29445138; PubMed Central PMCID: PMC5833425.

11.  Highfill CA, Tran JH, Nguyen SKT, Moldenhauer TR, Wang X, Macdonald SJ. Naturally Segregating Variation at Ugt86Dd Contributes to Nicotine Resistance in Drosophila melanogaster. Genetics.2017 Sep;207(1):311-325. PubMed PMID: 28743761; PubMed Central PMCID: PMC5586381.

12.  Hill T, Unckless RL. Baculovirus Molecular Evolution via Gene Turnover and Recurrent Positive Selection of Key Genes. J Virol.2017 Oct 27;91(22). pii: e01319-17. doi: 10.1128/JVI.01319-17. Print 2017 Nov 15. PubMed PMID: 28814516; PubMed Central PMCID: PMC5660496.

13.  Hill T, Unckless RL. The dynamic evolution of Drosophila innubila Nudivirus. Infect Genet Evol.2018 Jan;57:151-157. PubMed PMID: 29155284; PubMed Central PMCID: PMC5725240.

14.  Kaplan SV, Limbocker RA, Levant B, Johnson MA. Regional differences in dopamine release in the R6/2 mouse caudate putamen. Electroanalysis.2018 Jun;30(6):1066-1072.827. PubMed PMID: 29955208; PubMed Central PMCID: PMC6016844.

15.  McGill JL, Kelly SM, Kumar P, Speckhart S, Haughney SL, Henningson J, Narasimhan B, Sacco RE. Efficacy of mucosal polyanhydride nanovaccine against respiratory syncytial virus infection in the neonatal calf. Sci Rep.2018 Feb 14;8(1):3021. PubMed PMID: 29445124; PubMed Central PMCID: PMC5813012.

16.  Modaresi S, Pacelli S, Whitlow J, Paul A. Deciphering the role of substrate stiffness in enhancing the internalization efficiency of plasmid DNA in stem cells using lipid-based nanocarriers. Nanoscale. 2018 May 17;10(19):8947-8952. PubMed PMID: 29693099; PubMed Central PMCID: PMC5957767.

17.  Pacelli S, Acosta F, Chakravarti AR, Samanta SG, Whitlow J, Modaresi S, Ahmed RPH, Rajasingh J, Paul A. Nanodiamond-based injectable hydrogel for sustained growth factor release: Preparation, characterization and in vitro analysis. Acta Biomater.2017 Aug;58:479-491. PubMed PMID: 28532899; PubMed Central PMCID: PMC5560430.

18.  Pacelli S, Basu S, Berkland C, Wang J, Paul A. Design of a cytocompatible hydrogel coating to modulate properties of ceramic-based scaffolds for bone repair. Cell Mol Bioeng. 2018 Jun;11(3):211-217. Epub 2018 Apr 6. PubMed PMID: 30338007; PubMed Central PMCID: PMC6188648.

19.  Pacelli S, Basu S, Whitlow J, Chakravarti A, Acosta F, Varshney A, Modaresi S, Berkland C, Paul A. Strategies to develop endogenous stem cell-recruiting bioactive materials for tissue repair and regeneration. Adv Drug Deliv Rev.2017 Oct 1;120:50-70. Review. PubMed PMID: 28734899; PubMed Central PMCID: PMC5705585.

20.  Pacelli S, Maloney R, Chakravarti AR, Whitlow J, Basu S, Modaresi S, Gehrke S, Paul A. Controlling Adult Stem Cell Behavior Using Nanodiamond-Reinforce Hydrogel: Implication in Bone Regeneration Therapy. Sci Rep.2017 Jul 26;7(1):6577. PubMed PMID: 28747768; PubMed Central PMCID: PMC5529511.

21.  Reeves WM, Wu Y, Harder MJ, Veeman MT. Functional and evolutionary insights from the Ciona notochord transcriptome. Development. 2017 Sep 15;144(18):3375-3387. PubMed PMID: 28928284; PubMed Central PMCID: PMC5612257.

22.  Rusk RA, Palmer MV, Waters WR, McGill JL. Measuring bovine γδ T cell function at the site of Mycobacterium bovis infection. Vet Immunol Immunopathol.2017 Dec;193-194:38-49. PubMed PMID: 29129226; PubMed Central PMCID: PMC5703227.

23.  Saylor RA, Lunte SM. PDMS/glass hybrid device with a reusable carbon electrode for on-line monitoring of catecholamines using microdialysis sampling coupled to microchip electrophoresis with electrochemical detection. Electrophoresis. 2018 Feb;39(3):462-469. PubMed PMID: 28737835; PubMed Central PMCID: PMC5783789.

24.  Shin M, Field TM, Stucky CS, Furgurson MN, Johnson MA. Ex Vivo Measurement of Electrically Evoked Dopamine Release in Zebrafish Whole Brain. ACS Chem Neurosci.2017 Sep 20;8(9):1880-1888. PubMed PMID: 28617576; PubMed Central PMCID: PMC5846466.

25.  Smith BR, Unckless RL. Draft Genome Sequence of Lysinibacillus fusiformis Strain Juneja, a Laboratory-Derived Pathogen of Drosophila melanogaster. Genome Announc. 2018 Feb 1;6(5). pii: e01571-17. doi: 10.1128/genomeA.01571-17. PubMed PMID: 29437109; PubMed Central PMCID: PMC5794956.

26.  Waters R, Alam P, Pacelli S, Chakravarti AR, Ahmed RPH, Paul A. Stem cell-inspired secretome-rich injectable hydrogel to repair injured cardiac tissue. Acta Biomater. 2018 Mar 15;69:95-106. PubMed PMID: 29281806; PubMed Central PMCID: PMC5831493.

27.  Whitlow J, Pacelli S, Paul A. Multifunctional nanodiamonds in regenerative medicine: Recent advances and future directions. J Control Release. 2017 Sep 10;261:62-86. PubMed PMID: 28596105; PubMed Central PMCID: PMC5560434.

28.  Zhu Q, Heon M, Zhao Z, He M. Microfluidic engineering of exosomes: editing cellular messages for precision therapeutics. Lab Chip. 2018 Jun 12;18(12):1690-1703. PubMed PMID: 29780982; PubMed Central PMCID: PMC5997967.

Phase 1 Publications (NIH P20GM103638)

1.  Eshelman K, Yao H, Punchi Hewage AN, Deay JJ, Chandler JR, Rivera M. Inhibiting the BfrB:Bfd interaction in Pseudomonas aeruginosa causes irreversible iron accumulation in bacterioferritin and iron deficiency in the bacterial cytosol. Metallomics2017 Jun 21;9(6):646-659. PubMed PMID: 28318006; PubMed Central PMCID: PMC5494978.

2.  Fischer A, Harrison KS, Ramirez Y, Auer D, Chowdhury SR, Prusty BK, Sauer F, Dimond Z, Kisker C, Hefty PS, Rudel T. Chlamydia trachomatis-containing vacuole serves as deubiquitination platform to stabilize Mcl-1 and to interfere with host defense. Elife.2017 Mar 28;6. pii: e21465. PubMed PMID: 28347402; PubMed Central PMCID: PMC5370187.

3.  Fresta CG, Hogard ML, Caruso G, Melo Costa EE, Lazzarino G, Lunte SM. Monitoring carnosine uptake by RAW 264.7 macrophage cells using microchip electrophoresis with fluorescence detection. Anal. Methods2017Jan 21;9(3):402-408. PubMed PMID: 29104617; PubMed Central PMCID: PMC5663230.

4.  Godar SC, Bortolato M. What makes you tic? Translational approaches to study the role of stress and contextual triggers in Tourette syndrome. Neurosci Biobehav Rev.2017 May;76(Pt A):123-133. PubMed PMID: 27939782; PubMed Central PMCID: PMC5403589.

5.  Godar SC, Mosher LJ, Strathman HJ, Gochi AM, Jones CM, Fowler SC, Bortolato M. The D1CT-7 mouse model of Tourette syndrome displays sensorimotor gating deficits in response to spatial confinement. Br J Pharmacol. 2016 Jul;173(13):2111-21. PubMed PMID: 26171666. PubMed Central PMCID: PMC4908200.

6.  Hackett JL, Wang X, Smith BR, Macdonald SJ. Mapping QTL Contributing to Variation in Posterior Lobe Morphology between Strains of Drosophila melanogaster. PLoS One.2016 Sep 8;11(9):e0162573. PubMed PMID: 27606594; PubMed Central PMCID: PMC5015897.

7.  Hasan A, Waters R, Roula B, Dana R, Yara S, Alexandre T, Paul A. Engineered Biomaterials to Enhance Stem Cell-Based Cardiac Tissue Engineering and Therapy. Macromol Biosci.2016 Jul;16(7):958-77. PubMed PMID: 26953627; PubMed Central PMCID: PMC4931991.

8.  He M, Zeng Y. Microfluidic Exosome Analysis toward Liquid Biopsy for Cancer. J. Lab Autom. 2016 Aug;21(4):599-608. PubMed PMID: 27215792; PubMed Central PMCID: PMC5556932.

9.  Highfill CA, Reeves GA, Macdonald SJ. Genetic analysis of variation in lifespan using a multiparental advanced intercross Drosophila mapping population. BMC Genet. 2016 Aug 2;17:113. PubMed PMID: 27485207; PubMed Central PMCID: PMC4970266.

10.  Huang W, Beer RL, Delaspre F, Wang G, Edelman HE, Park H, Azuma M, Parsons MJ. Sox9b is a mediator of retinoic acid signaling restricting endocrine progenitor differentiation. Dev Biol. 2016 Oct 1;418(1):28-39. PubMed PMID: 27565026; PubMed Central PMCID: PMC5031550.

11.  Josephson MP, Aliani R, Norris ML, Ochs ME, Gujar M, Lundquist EA. The Caenorhabditis elegans NF2/Merlin Molecule NFM-1 Nonautonomously Regulates Neuroblast Migration and Interacts Genetically with the Guidance Cue SLT-1/Slit. Genetics2017 Feb;205(2):737-748. PubMed PMID: 27913619; PubMed Central PMCID: PMC5289848.

12.  Lee MM, Gao Z, Peterson BR. Synthesis of a Fluorescent Analogue of Paclitaxel That Selectively Binds Microtubules and Sensitively Detects Efflux by P-Glycoprotein. Angew Chem Int Ed Engl. 2017 Jun 6;56(24):6927-6931.PubMed PMID: 28485901; PubMed Central PMCID: PMC5679005.

13.  Lee MM, Peterson BR. Quantification of Small Molecule-Protein Interactions using FRET between Tryptophan and the Pacific Blue Fluorophore. ACS Omega.2016 Dec 31;1(6):1266-1276. PubMed ID: 28058293; PubMed Central PMCID: PMC5204206.

14.  Manthey JD, Campillo LC, Burns KJ, Moyle RG. Comparison of Target-Capture and Restriction-Site Associated DNA Sequencing for Phylogenomics: A Test in Cardinalid Tanagers (Aves, Genus: Piranga). Syst Biol. 2016 Jul;65(4):640-50. Epub 2016 Jan 28. PubMed PMID: 26821912; PubMed Central PMCID: PMC5841389.

15.  Mosher LJ, Frau R, Pardu A, Pes R, Devoto P, Bortolato M. Selective activation of D1 dopamine receptors impairs sensorimotor gating in Long-Evans rats. Br J Pharmacol.2016 Jul;173(13):2122-34; PubMed PMID: 26101934; PubMed Central PMCID: PMC4908197.

16.  Moyle RG, Oliveros CH, Andersen MJ, Hosner PA, Benz BW, Manthey JD, Travers SL, Brown RM, Faircloth BC. Tectonic collision and uplift of Wallacea triggered the global songbird radiation. Nat Commun.2016 Aug 30;7:12709. PubMed PMID: 27575437; PubMed Central PMCID: PMC5013600.

17.  Oakley CE, Ahuja M, Sun WW, Entwistle R, Akashi T, Yaegashi J, Guo CJ, Cerqueira GC, Russo Wortman J, Wang CC, Chiang YM, Oakley BR. Discovery of McrA, a master regulator of Aspergillus secondary metabolism. Mol Microbiol.2017 Jan;103(2):347-365. PubMed PMID: 27775185; PubMed Central PMCID: PMC5218965.

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20.  Pes R, Godar SC, Fox AT, Burgeno LM, Strathman HJ, Jarmolowicz DP, Devoto P, Levant B, Phillips PE, Fowler SC, Bortolato M. Pramipexole enhances disadvantageous decision-making: Lack of relation to changes in phasic dopamine release. Neuropharmacology 2017 Mar 1;114:77-87. PubMed ID: 27889491; PubMed Central PMCID: PMC5241163.

21.  Phaniraj S, Gao Z, Rane D, Peterson BR. Hydrophobic resorufamine derivatives: potent and selective red fluorescent probes of the endoplasmic reticulum of mammalian cells. Dyes Pigm. 2016 Dec;135:127-133. PubMed ID: 27765999; PubMed Central PMCID: PMC5066811.

22.  Plevniak K, Campbell M, Myers T, Hodges A, He, M. 3D Printed Auto-mixing Chip Enables Rapid Smartphone Diagnosis of Anemia. Biomicrofluidics2016 Oct 5;10(5):054113. eCollection 2016. PubMed ID: 27733894; PubMed Central PMCID: PMC5055529.

23.  Shankar M, Hossain MS, Biswas I. Pleiotropic Regulation of Virulence Genes in Streptococcus mutans by the Conserved Small Protein SprV. J Bacteriol. 2017 Mar 28;199(8). pii: e00847-16. PubMed ID: 28167518; PubMed Central PMCID: PMC5370425.

24.  Sofis MJ, Jarmolowicz DP, Kaplan SV, Gehringer RC, Lemley SM, Garg G, Blagg BS, Johnson MA. KU32 prevents 5-fluorouracil induced cognitive impairment. Behav Brain Res.2017 Jun 30;329:186-190. PubMed PMID: 28359881; PubMed Central PMCID: PMC5846472.

25.  Tseng BS, Majerczyk CD, Passos da Silva D, Chandler JR, Greenberg EP, Parsek MR. Quorum Sensing Influences Burkholderia thailandensis Biofilm Development and Matrix Production. J Bacteriol. 2016 Sep 9;198(19):2643-50. PubMed PMID: 27068594; PubMed Central PMCID: PMC5019063.

26.  Zhang P,He M, Zeng Y. Ultrasensitive microfluidic analysis of circulating exosomes using a nanostructured graphene oxide/polydopamine coating. Lab Chip. 2016 Aug 2;16(16):3033-42. PubMed PMID: 27045543; PubMed Central PMCID: PMC4970962.

1.  Chakraborty A, Hui E, Waring AJ, Dhar P. Combined effect of synthetic protein, Mini-B, and cholesterol on a model lung surfactant mixture at the air-water interface. Biochim Biophys Acta.2016 Apr;1858(4):904-12. PubMed PMID: 26775740; PubMed Central PMCID: PMC5705005.

2.  Colicchio JM, Miura F, Kelly JK, Ito T, Hileman LC. DNA methylation and gene expression in Mimulus guttatus. BMC Genomics. 2015 Jul 7;16:507. PubMed PMID: 26148779; PubMed Central PMCID: PMC4492170.

3.  de Campos RP, Siegel JM, Fresta CG, Caruso G, da Silva JA, Lunte SM. Indirect detection of superoxide in RAW 264.7 macrophage cells using microchip electrophoresis coupled to laser-induced fluorescence. Anal Bioanal Chem.2015 Sep;407(23):7003-12. PubMed PMID: 26159570; PubMed Central PMCID: PMC4898195.

4.  Erwin AA, Galdos MA, Wickersheim ML, Harrison CC, Marr KD, Colicchio JM, Blumenstiel JP. piRNAs Are Associated with Diverse Transgenerational Effects on Gene and Transposon Expression in a Hybrid Dysgenic Syndrome of D virilis. PLoS Genet. 2015 Aug;11(8):e1005332. PubMed PMID: 26241928; PubMed Central PMCID: PMC4524669.

5.  Frau R, Abbiati F, Bini V, Casti A, Caruso D, Devoto P, Bortolato M. Targeting neurosteroid synthesis as a therapy for schizophrenia-related alterations induced by early psychosocial stress. Schizophr Res.2015 Nov;168(3):640-8. PubMed PMID: 25999042; PubMed Central PMCID: PMC4628592.

6.  Frau R, Mosher LJ, Bini V, Pillolla G, Pes R, Saba P, Fanni S, Devoto P, Bortolato M. The neurosteroidogenic enzyme 5α-reductase modulates the role of D1 dopamine receptors in rat sensorimotor gating. Psychoneuroendocrinology.2016 Jan;63:59-67. PubMed PMID: 26415119; PubMed Central PMCID: PMC4695380.

7.  Grismer JL, Schulte JA 2nd, Alexander A, Wagner P, Travers SL, Buehler MD, Welton LJ, Brown RM. The Eurasian invasion: phylogenomic data reveal multiple Southeast Asian origins for Indian Dragon Lizards. BMC Evol Biol.2016 Feb 19;16:43. PubMed PMID: 26896057; PubMed Central PMCID: PMC4759850.

8.  Hanschen ER, Marriage TN, Ferris PJ, Hamaji T, Toyoda A, Fujiyama A, Neme R, Noguchi H, Minakuchi Y, Suzuki M, Kawai-Toyooka H, Smith DR, Sparks H, Anderson J, Bakarić R, Luria V, Karger A, Kirschner MW, Durand PM, Michod RE, Nozaki H, Olson BJ. The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity. Nat Commun.2016 Apr 22;7:11370. PubMed PMID: 27102219; PubMed Central PMCID: PMC4844696.

9.  Hasan A, Khattab A, Islam MA, Hweij KA, Zeitouny J, Waters R, Sayegh M, Hossain M, Paul A. Injectable Hydrogels for Cardiac Tissue Repair after Myocardial Infarction. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 2015 November;2(11):1500122. PubMed PMID: 27668147; PubMed Central PMCID: PMC5033116.

10.  Hasan A, Paul A, Memic A, Khademhosseini A. A multilayered microfluidic blood vessellike structure. Biomed Microdevices. 2015 Oct;17(5):88. PubMed PMID: 26256481; PubMed Central PMCID: PMC4890640.

11.  Hymel D, Cai S, Sun Q, Henkhaus RS, Perera C, Peterson BR. Fluorescent mimics of cholesterol that rapidly bind surfaces of living mammalian cells. Chem Commun (Camb). 2015 Oct 7;51(78):14624-7. PubMed PMID: 26287483; PubMed Central PMCID: PMC4620717.

12.  Josephson MP, Chai Y, Ou G, Lundquist EA. EGL-20/Wnt and MAB-5/Hox Act Sequentially to Inhibit Anterior Migration of Neuroblasts in C elegans. PLoS One.2016;11(2):e0148658. PubMed PMID: 26863303; PubMed Central PMCID: PMC4749177.

13.  Kaplan SV, Limbocker RA, Divis JL, Osterhaus GL, Newby MD, Newman BD, Mathews TA, Johnson MA. Impaired Brain Dopamine and Serotonin Release and Uptake in Wistar Rats Following Treatment with Carboplatin. ACS Chem. Neurosci.2016, 7(6):689-699. PubMed PMID: 27145395; PubMed Central PMCID: PMC4911621.

14.  Ma J, Pan P, Anyika M, Blagg BS, Dobrowsky RT. Modulating Molecular Chaperones Improves Mitochondrial Bioenergetics and Decreases the Inflammatory Transcriptome in Diabetic Sensory Neurons. ACS Chem Neurosci.2015 Sep 16;6(9):1637-48. PubMed PMID: 26161583; PubMed Central PMCID: PMC4573952.

15.  McGill JL, Nair AD, Cheng C, Rusk RA, Jaworski DC, Ganta RR. Vaccination with an Attenuated Mutant of Ehrlichia chaffeensis Induces Pathogen-Specific CD4+ T Cell Immunity and Protection from Tick-Transmitted Wild-Type Challenge in the Canine Host. PLoS One. 2016;11(2):e0148229. PubMed PMID: 26841025; PubMed Central PMCID: PMC4739596.

16.  McGill JL, Rusk RA, Guerra-Maupome M, Briggs RE, Sacco RE. Bovine Gamma Delta T Cells Contribute to Exacerbated IL-17 Production in Response to Co-Infection with Bovine RSV and Mannheimia haemolytica. PLoS One. 2016;11(3):e0151083. PubMed PMID: 26942409; PubMed Central PMCID: PMC4778910.

17.  Meinig JM, Fu L, Peterson BR. Synthesis of Fluorophores that Target Small Molecules to the Endoplasmic Reticulum of Living Mammalian Cells. Angew Chem Int Ed Engl.2015 Aug 10;54(33):9696-9. PubMed PMID: 26118368; PubMed Central PMCID: PMC4539238.

18.  Miller DE, Smith CB, Yeganeh Kazemi N, Cockrell AJ, Arvanitakis AV, Blumenstiel JP, Jaspersen SL, Hawley RS. Whole-Genome Analysis of Individual Meiotic Events in Drosophila melanogaster Reveals that Noncrossover Gene Conversions are Insensitive to Interference and the Centromere Effect. Genetics. 2016 May;203(1):159-71. PubMed PMID: 26944917; PubMed Central PMCID: PMC4858771.

19.  Oborny NJ, Costa EE, Suntornsuk L, Abreu FC, Lunte SM. Evaluation of a Portable Microchip Electrophoresis Fluorescence Detection System for the Analysis of Amino Acid Neurotransmitters in Brain Dialysis Samples. Anal Sci.2016;32(1):35-40. PubMed PMID: 26753703; PubMed Central PMCID: PMC4875779.

20.  Paul A, Manoharan V, Krafft D, Assmann A, Uquillas JA, Shin SR, Hasan A, Hussain MA, Memic A, Gaharwar AK, Khademhosseini A. Nanoengineered biomimetic hydrogels for guiding human stem cell osteogenesis in three dimensional microenvironments. J. Mater. Chem. B. 2016; 4(20):3544-3554. PubMed PMID: 27525102; PubMed Central PMCID: PMC4980085.

21.  Saylor RA, Reid EA,Lunte SM. Microchip electrophoresis with electrochemical detection for the determination of analytes in the dopamine metabolic pathway. Electrophoresis. 2015 Aug;36(16):1912-9. PubMed PMID: 25958983; PubMed Central PMCID: PMC4875780.

22.  Schwieterman AA, Steves AN, Yee V, Donelson CJ, Bentley MR, Santorella EM, Mehlenbacher TV, Pital A, Howard AM, Wilson MR, Ereddia DE, Effrein KS, McMurry JL, Ackley BD, Chisholm AD, Hudson ML. The Caenorhabditis elegans Ephrin EFN-4 Functions Non-cell Autonomously with Heparan Sulfate Proteoglycans to Promote Axon Outgrowth and Branching. Genetics. 2016 Feb;202(2):639-60. PubMed PMID: 26645816; PubMed Central PMCID: PMC4788240.

23.  Shang Y, Zeng Y, Zeng Y. Integrated Microfluidic Lectin Barcode Platform for High-Performance Focused Glycomic Profiling. Sci Rep. 2016 Feb 2;6:20297. PubMed PMID: 26831207; PubMed Central PMCID: PMC4735825.

24.  Smalley NE, An D, Parsek MR, Chandler JR, Dandekar AA. Quorum Sensing Protects Pseudomonas aeruginosa against Cheating by Other Species in a Laboratory Coculture Model. J. Bacteriol.2015 Oct;197(19):3154-9. PubMed PMID: 26195596; PubMed Central PMCID: PMC4560282.

25.  Truong TT, Seyedsayamdost M, Greenberg EP, Chandler JR. A Burkholderia thailandensis Acyl-Homoserine Lactone-Independent Orphan LuxR Homolog That Activates Production of the Cytotoxin Malleilactone. J. Bacteriol.2015 Nov;197(21):3456-62. PubMed PMID: 26283771; PubMed Central PMCID: PMC4621068.

26.  Wang X, Hinshaw KC, Macdonald SJ, Chandler JR. Draft Genome Sequence of Chromobacterium violaceum Strain CV017. Genome Announc.2016 Mar 3;4(2) PubMed PMID: 26941151; PubMed Central PMCID: PMC4777762.

27.  Wang Y, Southard KM, Zeng Y. Digital PCR using micropatterned superporous absorbent array chips. Analyst.2016 Mar 24; PubMed PMID: 27010726; PubMed Central PMCID: PMC4899130.

28.  Waters WR, Maggioli MF, Palmer MV, Thacker TC, McGill JL, Vordermeier HM, Berney-Meyer L, Jacobs WR Jr, Larsen MH. Interleukin-17A as a Biomarker for Bovine Tuberculosis. Clin Vaccine Immunol.2015 Dec 16;23(2):168-80. PubMed PMID: 26677202; PubMed Central PMCID: PMC4744917.

29.  Waters R, Pacelli S, Maloney R, Medhi I, Ahmed RP,Paul A. Stem cell secretome-rich nanoclay hydrogel: a dual action therapy for cardiovascular regeneration. Nanoscale. 2016 Mar 31;8(14):7371-6. PubMed PMID: 26876936; PubMed Central PMCID: PMC4863075.

30.  Whitlow J, Pacelli S, Paul A. Polymeric nanohybrids as a new class of therapeutic biotransporters. Macromol. Chem. Phys. 2016 Jun; 217(11): 1245-1259. Epub 2016 Apr 26. PubMed PMID: 29151704; PubMed Central PMCID: PMC5693378.

31.  Wiley EO, Fuiten AM, Doosey, MH, Lohman BK, Merkes, C, Azuma, M. The Caudal Skeleton of the Zebrafish, Danio rerio, from a Phylogenetic Perspective: A Polyural Interpretation of Homologous Structures. Copeia2015 103(4): 740-50. PubMed PMID: 28250540; PubMed Central PMCID: PMC5328193.

32.  Zhao Z, Yang Y, Zeng Y, He M. A microfluidic ExoSearch chip for multiplexed exosome detection towards blood-based ovarian cancer diagnosis. Lab Chip.2016 Jan 26;16(3):489-96. PubMed PMID: 26645590; PubMed Central PMCID: PMC4729647.

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2.  Alhakamy NA, Elandaloussi I, Ghazvini S, Berkland CJ, Dhar P. Effect of lipid headgroup charge and pH on the stability and membrane insertion potential of calcium condensed gene complexes. Langmuir.2015 Apr 14;31(14):4232-45. doi: 10.1021/la504970n. Epub 2015 Mar 30. PubMed PMID: 25768428. PubMed Central PMCID: PMC5704962.

3.  Chakraborty A, Mucci NJ, Tan ML, Steckley A, Zhang T, Forrest ML, Dhar P. Phospholipid composition modulates carbon nanodiamond-induced alterations in phospholipid domain formation. Langmuir. 2015 May 12;31(18):5093-104. PubMed PMID: 25876023; PubMed Central PMCID: PMC4702515.

4.  Frau R, Bini V, Pillolla G, Malherbe P, Pardu A, Thomas AW, Devoto P, Bortolato M. Positive allosteric modulation of GABAB receptors ameliorates sensorimotor gating in rodent models. CNS Neurosci Ther.2014 Jul;20(7):679-84. PubMed PMID: 24703381; PubMed Central PMCID: PMC4062587.

5.  Ghazvini S, Ricke B, Zasadzinski JA, Dhar P. Monitoring phases and phase transitions in phosphatidylethanolamine monolayers using active interfacial microrheology. Soft Matter.2015 Apr 22;11(17):3313-21. PubMed PMID: 25782993; PubMed Central PMCID: PMC4408260.

6.  Godar SC, Mosher LJ, Di Giovanni G,Bortolato M. Animal models of tic disorders: a translational perspective. J Neurosci Methods. 2014 Dec 30;238:54-69. PubMed PMID: 25244952; PubMed Central PMCID: PMC4345166.

7.  Gunasekara DB, Siegel JM, Caruso G, Hulvey MK, Lunte SM. Microchip electrophoresis with amperometric detection method for profiling cellular nitrosative stress markers. Analyst. 2014 Jul 7;139(13):3265-73. PubMed PMID: 24728039; PubMed Central PMCID: PMC4084785.

8.  Hartin SN, Hudson ML, Yingling C, Ackley BD. A Synthetic Lethal Screen Identifies a Role for Lin-44/Wnt in C. elegans Embryogenesis. PLoS One. 2015 May 4; 10(5):e0121397. PubMed PMID: 25938228; PubMed Central PMCID: PMC4418752.

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10.  Meinig JM, Peterson BR. Anticancer/antiviral agent Akt inhibitor-IV massively accumulates in mitochondria and potently disrupts cellular bioenergetics. ACS Chem Biol.2015 Feb 20;10(2):570-6. PubMed PMID: 25415586; PubMed Central PMCID: PMC4340353.

11.  Meneses D, Gunasekara DB, Pichetsurnthorn P, da Silva JA, de Abreu FC, Lunte SM. Evaluation of in-channel amperometric detection using a dual-channel microchip electrophoresis device and a two-electrode potentiostat for reverse polarity separations. Electrophoresis. 2015 Feb;36(3):441-8. PubMed PMID: 25256669; PubMed Central PMCID: PMC4433753.

12.  Merkes C, Turkalo TK, Wilder N, Park H, Wenger LW, Lewin SJ, Azuma M. Ewing sarcoma ewsa protein regulates chondrogenesis of Meckel's cartilage through modulation of Sox9 in zebrafish. PLoS One.2015;10(1):e0116627. PubMed PMID: 25617839; PubMed Central PMCID: PMC4305327.

13.  Paul A. Nanocomposite hydrogels: an emerging biomimetic platform for myocardial therapy and tissue engineering. Nanomedicine (Lond). 2015 May;10(9):1371-4. PubMed PMID: 25996115; PubMed Central PMCID: PMC4854277.

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15.  Shin M, Kaplan SV, Raider KD, Johnson MA. Simultaneous measurement and quantitation of 4-hydroxyphenylacetic acid and dopamine with fast-scan cyclic voltammetry. Analyst.2015 May 7;140(9):3039-47. PubMed PMID: 25785694; PubMed Central PMCID: PMC4507372.

16.  Sun M, Johnson MA. Measurement of total antioxidant capacity in sub-μL blood samples using craft paper-based analytical devices. RSC Advances.2015, 5(69):55633-55639. PubMed Central PMCID: PMC5026239.

17.  Sundarajan L, Norris ML, Lundquist EA. SDN-1/Syndecan Acts in Parallel to the Transmembrane Molecule MIG-13 to Promote Anterior Neuroblast Migration. G3 (Bethesda). 2015 May 28;5(8):1567-74. PubMed PMID: 26022293; PubMed Central PMCID: PMC4528313.

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2.  Blumenstiel JP. Whole genome sequencing in Drosophila virilis identifies Polyphemus, a recently activated Tc-1 like transposon with a possible role in hybrid dysgenesis. Mobile DNA. 2014, Feb 20;5(1):6. PubMed PMID: 24555450; PubMed PMCID: PMC3941972.

3.  Blumenstiel JP, Chen X, He M, Bergman CM. An Age-of-Allele test for neutrality of transposable element insertions. Genetics. 2014 Feb;196(2):523-38. PubMed PMID: 24336751; PubMed Central PMCID: PMC3914624.

4.  Bortolato M, Frau R, Godar SC, Mosher LJ, Paba S, Marrosu F, Devoto P. The Implication of Neuroactive Steroids in Tourette's Syndrome Pathogenesis: A Role for 5α-Reductase? J Neuroendocrinol. 2013 Nov;25(11):1196-208. PubMed PMID: 23795653; PubMed Central PMCID: PMC3849218.

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14.  Woydziak ZR, Fu L, Peterson BR. Efficient and Scalable Synthesis of 4-Carboxy-Pennsylvania Green Methyl Ester: A Hydrophobic Building Block for Fluorescent Molecular Probes. Synthesis. 2014, 46, 158-164. PubMed PMID: 24914246; PubMed Central PMCID: PMC4048033.

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